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A new class of phytoplankton models with a mechanistic basis has been presented in a companion paper (Baklouti, M., Diaz, F., Pinazo, C., Faure, V., Queguiner, B., 2006. Investigation of mechanistic formulations depicting phytoplankton dynamics for models of marine pelagic ecosystems. Progress in Oceanography). It is the default class of models implemented in our new numerical tool Eco3M, which is dedicated to Ecological, Mechanistic and Modular Modelling. A brief overview of its main features is given in Section 2 of the present paper. In the next sections, a particular phytoplankton model among the aforementioned class has been tested with special emphasis on the mechanistic photosynthesis component relating the photosynthetic rate to the proportion of open photosystems II. The present study encompasses several essential steps that are inherent to any modelling, including model reduction, model sensitivity analysis and comparison of model outputs with experiments. The global sensitivity analysis of the plankton model for one-at-a-time parameter perturbations revealed a restricted set of parameters having major influence on the model outputs. Sensitivity tests involving simultaneous parameter perturbations within the range actually encountered in the literature provided a confidence interval for the outputs. Chemostat experiments performed on nitrate-limited diatoms grown under low (LL) and high-light (HL) conditions have been used for comparison with model outputs. The good fit between measured data and model outputs using the same parameter values in both the LL and HL cases demonstrates the ability of our model to represent the main features of phytoplankton dynamics including photoacclimation. Finally, Eco3M is ultimately intended to include explicit bacterial and zooplankton compartments, as well as to be coupled with ocean circulation models, but the intrinsic behavior of the phytoplankton model has been investigated first, independently of physical forcing. 相似文献
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Zelia Dionnet Rosario Brunetto Alice Alon‐Toppani Stefano Rubino Donia Baklouti Ferenc Borondics Anne‐Ccile Buellet Zahia Djouadi Andrew King Tomoki Nakamura Alessandra Rotundi Christophe Sandt David Troadec Akira Tsuchiyama 《Meteoritics & planetary science》2020,55(7):1645-1664
In the near future, a new generation of sample return missions (Hayabusa2, OSIRIS‐REx, MMX, etc.) will collect samples from small solar system bodies. To maximize the scientific outcome of laboratory studies and minimize the loss of precious extraterrestrial samples, an analytical sequence from less destructive to more destructive techniques needs to be established. In this work, we present a combined X‐ray and IR microtomography applied to five Itokawa particles and one fragment of the primitive carbonaceous chondrite Paris. We show that this analytical approach is able to provide a 3‐D physical and chemical characterization of individual extraterrestrial particles, using the measurement of their 3‐D structure and porosity, and the detection of mineral and organic phases, and their spatial co‐localization in 3‐D. We propose these techniques as an efficient first step in a multitechnique analytical sequence on microscopic samples collected by space missions. 相似文献
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Lluís Casas Boutheina Fouzai Marta Prevosti Nejia Laridhi‐Ouazaa Ramon Jrrega Siwar Baklouti 《Geoarchaeology》2016,31(6):564-576
Two isolated kilns of unknown age and three well‐dated artifacts from Tunisia have been investigated using archaeomagnetic techniques. Dating has been attempted for the kilns and archaeomagnetic intensities have been obtained for the artifacts. The kilns lack datable artifacts although one of them (Sidi Zahruni) could be related to a nearby late Roman site. Comparison with the SCHA.DIF.3K regional geomagnetic model suggests for both kilns two possible periods of last use, either Roman or Medieval. Three archaeomagnetic intensities were obtained for the well‐dated ceramic artifacts adding to scarce archaeomagnetic data from Africa. The new data along with recently published archaeointensities from other Tunisian sites have been compared with the regional model SCHA.DIF.3K, its updated version, and the global ARCH3k.1 geomagnetic model. The models show relatively good agreement with the new archaeointensities and with previously published intensities. The uncertainty of the experimental data tends to increase for older artifacts, and their agreement with the geomagnetic models diminishes. The observed trend of the intensity models to underestimate values in the Tunisian area for the Roman period could be overcome by adding new data from well‐dated artifacts from North African, particularly from pre‐Roman and Roman sites. 相似文献
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Elena Alekseenko Virginie Raybaud Boris Espinasse François Carlotti Bernard Queguiner Bénédicte Thouvenin Pierre Garreau Melika Baklouti 《Ocean Dynamics》2014,64(2):179-207
The 3D hydrodynamic Model for Applications at Regional Scale (MARS3D) was coupled with a biogeochemical model developed with the Ecological Modular Mechanistic Modelling (Eco3M) numerical tool. The three-dimensional coupled model was applied to the NW Mediterranean Sea to study the dynamics of the key biogeochemical processes in the area in relation with hydrodynamic constraints. In particular, we focused on the temporal and spatial variability of intracellular contents of living and non-living compartments. The conceptual scheme of the biogeochemical model accounts for the complex food web of the NW Mediterranean Sea (34 state variables), using flexible plankton stoichiometry. We used mechanistic formulations to describe most of the biogeochemical processes involved in the dynamics of marine pelagic ecosystems. Simulations covered the period from September 1, 2009 to January 31, 2011 (17 months), which enabled comparison of model outputs with situ measurements made during two oceanographic cruises in the region (Costeau-4: April 27–May 2, 2010 and Costeau-6: January 23–January 27, 2011). 相似文献
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Marine circulation above the northern Brazilian continental shelf is subject to energetic forcing factors of various origins: high water buoyancy fluxes induced by the Amazon River freshwater discharge, a strong coastal current associated with a mesoscale current (North Brazil Current (NBC)), a forcing by semidiurnal tide and by Northeast or Southeast trade winds according to the season. Using a three-dimensional (3-D) hydrodynamic numerical model (MOBEEHDYCS), and realistic bathymetry and coastline of the northern Brazilian shelf, this paper aims at studying the influence of some specific physical processes on the morphology of the Amazon plume. The very large volume discharge (180 000 m3/s on average) and the weak effect of Coriolis force are additional characteristics of the studied system, which induce a particular dynamics. The various forcing factors are successively introduced into the model in order to simulate and to determine their respective influences upon the plume extent and the hydrodynamics at the shelf scale. Simulation reveal that the coastal current is at the origin of the permanent northwestward Amazon plume extension while wind effect can either reinforce or moderate this situation. The tide intervenes also to modify the position of the salinity front: a horizontal migration of salinity front is observed under its action. 相似文献
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Realistic modelling of marine ecosystems is necessary for improving our understanding of the ocean’s biogeochemical state and for predicting their response to anthropic perturbations. An essential step in achieving this task is the use of mechanistic formulations to describe the biogeochemical processes involved in the dynamics of marine pelagic ecosystems. This study provides a review on some modelling strategies for some of the key processes involved in the dynamics of phytoplankton. It encompasses the most advanced work in terms of mechanistic understanding and, therefore, mainly deals with photosynthesis (including photoacclimation and photoinhibition), respiration, and nutrient uptake (including multi-limitation of algal growth by nutrients). We highlight, that in many ecosystem models, phytoplankton processes are still described more or less empirically, mainly due to a lack of biochemical knowledge, or if a mechanistic formulation exists, the parameters are often difficult to assess experimentally. As a result of this investigation, a preliminary structure for a generic phytoplankton model is delivered in the last section of this paper. This model includes a mechanistic representation of photosynthesis/photoinhibition based on photosystem II status, as well as new formulations for photoacclimation and dissolved organic matter exudation processes. The model sensitivity analysis with regard to its parameters and a comparison with chemostat experimental data are presented in a companion paper [Baklouti, M., Faure, V., Pawlowski, L., Sciandra, A., 2006. Investigation and sensitivity analysis of a mechanistic phytoplankton model implemented in a new modular numerical tool (Eco3M) dedicated to biogeochemical modelling. Progress in Oceanography]. Finally, this new class of multi-element, multi-species phytoplankton models will provide the basis for future studies on ecosystem modelling. 相似文献
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Melika Nematolahi Vahidreza Jalali Majid Hejazi Mehrizi 《Arabian Journal of Geosciences》2018,11(16):473
Soil saturated hydraulic conductivity (Ks) is considered as soil basic hydraulic property, and its precision estimation is a key element in modeling water flow and solute transport processes both in the saturated and vadose zones. Although some predictive methods (e.g., pedotransfer functions, PTFs) have been proposed to indirectly predict Ks, the accuracy of these methods still needs to be improved. In this study, some easily available soil properties (e.g., particle size distribution, organic carbon, calcium carbonate content, electrical conductivity, and soil bulk density) are employed as input variables to predict Ks using a fuzzy inference system (FIS) trained by two different optimization techniques: particle swarm optimization (PSO) and genetic algorithm (GA). To verify the derived FIS, 113 soil samples were taken, and their required physical properties were measured (113 sample points?×?7 factors?=?791 input data). The initial FIS is compared with two methods: FIS trained by PSO (PSO-FIS) and FIS trained by GA (GA-FIS). Based on experimental results, all three methods are compared according to some evaluation criteria including correlation coefficient (r), modeling efficiency (EF), coefficient of determination (CD), root mean square error (RMSE), and maximum error (ME) statistics. The results showed that the PSO-FIS model achieved a higher level of modeling efficiency and coefficient of determination (R2) in comparison with the initial FIS and the GA-FIS model. EF and R2 values obtained by the developed PSO-FIS model were 0.69 and 0.72, whereas they were 0.63 and 0.54 for the GA-FIS model. Moreover, the results of ME and RMSE indices showed that the PSO-FIS model can estimate soil saturated hydraulic conductivity more accurate than the GA-FIS model with ME?=?10.4 versus 11.5 and RMSE?=?5.2 versus 5.5 for PSO-FIS and GA-FIS, respectively. 相似文献
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